A genome resource for 192 Verticillium dahliae isolates infecting potatoes across Canada

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dc.contributor.authorArseneault, Tanya
dc.contributor.authorLafond-Lapalme, Joël
dc.contributor.authorGonzalez, Chary Esteban Quinche
dc.contributor.authorJordan, Katerina S.
dc.contributor.authorYevtushenko, Dmytro P.
dc.contributor.authorBarrett, Ryan
dc.contributor.authorVan der Heyden, Hervé
dc.contributor.authorChen, Dahu
dc.contributor.authorTenuta, Mario
dc.contributor.authorMimee, Benjamin
dc.date.accessioned2024-08-21T19:04:48Z
dc.date.available2024-08-21T19:04:48Z
dc.date.issued2023
dc.descriptionOpen access article. Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International license (CC BY-NC-ND 4.0) applies
dc.description.abstractVerticillium dahliae is an important soilborne pathogen causing Verticillium wilt. It is also the primary causal agent of potato early dying, a disease complex involving the root-lesion nematode. Here, we report the whole-genome sequencing of 192 isolates of V. dahliae originating from the major potato production areas across Canada. Our results yielded a resource of 277,010 genetic variations that will be useful for genetic analyses and revealed the presence of two major lineages, both present in all provinces but exhibiting differences in regional prevalence.
dc.description.peer-reviewYes
dc.identifier.citationArseneault, T., Lafond-Lapalme, J., Gonzalez, C. E. Q., Jordan, K. S., Yevtushenko, D., Barrett, R., Van der Heyden, H., Chen, D., Tenuta, M., & Mimee, B. (2023). A genome resource for 192 Verticillium dahliae isolates infecting potatoes across Canada. PhytoFrontiers, 3(3), 753-757. https://doi.org/10.1094/PHYTOFR-03-23-0041-A
dc.identifier.urihttps://hdl.handle.net/10133/6877
dc.language.isoen
dc.publisherACS Publications
dc.publisher.departmentDepartment of Biological Sciences
dc.publisher.facultyArts and Science
dc.publisher.institutionSaint-Jean-sur-Richelieu Research and Development Centre
dc.publisher.institutionUniversity of Guelph
dc.publisher.institutionUniversity of Lethbridge
dc.publisher.institutionPrince Edward Island Potato Board
dc.publisher.institutionCompagnie de recherche Phytodata
dc.publisher.institutionFredericton Research and Development Centre
dc.publisher.institutionUniversity of Manitoba
dc.publisher.urlhttps://doi.org/10.1094/PHYTOFR-03-23-0041-A
dc.subjectMinimum spanning network
dc.subjectPhylogeny
dc.subjectPopulation genomics
dc.subjectVariant calling
dc.subjectVerticillium dahliae
dc.subjectWhole-genome sequencing
dc.subjectPotato production
dc.subject.lcshMetagenomics
dc.subject.lcshSoilborne plant pathogens
dc.subject.lcshPotatoes--Diseases and pests--Canada
dc.titleA genome resource for 192 Verticillium dahliae isolates infecting potatoes across Canada
dc.typeArticle
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